Keio University

Published papers

Yamamoto, Eiji

21-40 items (total 75)

Self-Viscophoresis: Autonomous Motion by Biasing Thermal Fluctuations via Self-Generated Viscosity Asymmetry

Author
B Nakayama, Y Takagi, R Hirose, M Ichikawa, M Tani, I Kawamata, ...
Publication Title
Magazine name arXiv preprint arXiv:2602.14475 (Publication Date)2026)

Statistical Interaction Analysis Using Fragment Molecular Orbital (FMO) Calculations for Factor Xa Inhibitors

Author
R Yoshine, Y Hirano, H Doi, S Kitahara, K Akisawa, K Okuwaki, ...
Publication Title
(Publication Date)2026)

Vibrational spectra analysis of HOD molecules in alpha-D-glucose solution using molecular dynamics simulations

Author
S Nakamura, K Tomobe, E Yamamoto, T Ishiyama, M Yasui, K Yasuoka
Publication Title
(Publication Date)2019)

Water-ethanol separation with Janus tip charged carbon nanotubes

Author
Ono, Y; Yamamoto, E; Yasuoka, K
Publication Title
Volume 27(Issue 47) Start Page 25524 - End Page 25535 (Publication Date)2025/12)
ISSN
1463-9076

Water–ethanol separation with Janus tip charged carbon nanotubes

Author
Y Ono, E Yamamoto, K Yasuoka
Publication Title
Magazine name Physical Chemistry Chemical Physics 27 (47), 25524-25535 (Publication Date)2025)

Common Force Field Thermodynamics of Cholesterol

Author
F Giangreco, E Yamamoto, Y Hirano, M Hodoscek, V Knecht, M di Giosia, ...
Publication Title
Magazine name The Scientific World Journal 2013 (Publication Date)2013)
ISSN
1537-744X

Origin of 1/f noise in hydration dynamics on lipid membrane surfaces

Author
E Yamamoto, T Akimoto, M Yasui, K Yasuoka
Publication Title
Magazine name Scientific reports 5, 8876 (Publication Date)2015)
ISSN
2045-2322

Water molecules in CNT–Si3N4 membrane: Properties and the separation effect for water–alcohol solution

Author
Winarto, E Yamamoto, K Yasuoka
Publication Title
Magazine name The Journal of Chemical Physics 155 (10), 104701 (Publication Date)2021)

Wetting hysteresis induces effective unidirectional water transport through a fluctuating nanochannel

Author
N Arai, E Yamamoto, T Koishi, Y Hirano, K Yasuoka, T Ebisuzaki
Publication Title
Magazine name arXiv preprint arXiv:2204.09251 Volume 8(Issue 5) Start Page 652 - End Page 661 (Publication Date)2022)
ISSN
2055-6756

Discovery of Pseudo-Luciferase Activity in Immunoglobulin G (IgG) and Its Application to the Detection of IgG Denaturation

Author
R Nishihara, Y Kihara, E Yamamoto, Y Hirano, R Kurita
Publication Title
Magazine name Analytical Chemistry (Publication Date)2025)

BPS2025-Reentrant phase behavior and selective partitioning in protein-RNA condensates using molecular dynamics simulation

Author
I Yasuda, S Bülow, G Tesei, E Yamamoto, K Yasuoka, K Lindorff-Larsen
Publication Title
Magazine name Biophysical Journal 124 (3), 29a-30a (Publication Date)2025)

1/f fluctuations of amino acids regulate water transportation in aquaporin 1

Author
E Yamamoto, T Akimoto, Y Hirano, M Yasui, K Yasuoka
Publication Title
Magazine name Physical Review E 89 (2), 022718 Volume 89(Issue 2) (Publication Date)2014)
ISSN
1539-3755

Power-law trapping of water molecules on the lipid-membrane surface induces water retardation

Author
E Yamamoto, T Akimoto, Y Hirano, M Yasui, K Yasuoka
Publication Title
Magazine name Physical Review E 87 (5), 052715 Volume 87(Issue 5) (Publication Date)2013)
ISSN
1539-3755

Water-methanol separation with carbon nanotubes and electric fields

Author
Winarto, D Takaiwa, E Yamamoto, K Yasuoka
Publication Title
Magazine name Nanoscale Volume 7(Issue 29) Start Page 12659 - End Page 12665 (Publication Date)2015)
ISSN
2040-3364

Computational and theoretical approaches for studies of a lipid recognition protein on biological membranes

Author
E Yamamoto
Publication Title
Magazine name Biophysics and Physicobiology 14, 153-160 Start Page 153 - End Page 160 (Publication Date)2017)
ISSN
2189-4779

Distributional behaviors of time-averaged observables in the Langevin equation with fluctuating diffusivity: Normal diffusion but anomalous fluctuations

Author
T Akimoto, E Yamamoto
Publication Title
Magazine name Physical Review E 93 (6), 062109 Volume 93(Issue 6) (Publication Date)2016)
ISSN
2470-0045

Velocity auto-correlation function of ions and water molecules in different concentrations, anions and ion clusters

Author
K Tomobe, E Yamamoto, D Kojic, M Yasui, K Yasuoka
Publication Title
Magazine name Molecular Simulation 41 (10-12), 840-844 Volume 41(Issue 10-12) Start Page 840 - End Page 844 (Publication Date)2015)
ISSN
0892-7022

Water permeation through the internal water pathway in activated GPCR rhodopsin.

Author
K Tomobe, E Yamamoto, K Kholmurodov, K Yasuoka
Publication Title
Magazine name PloS one 12 (5), e0176876 Volume 12(Issue 5) (Publication Date)2017)
ISSN
1932-6203

Phase-change Janus particles with switchable dual properties

Author
R Soma, B Nakayama, M Kuwahara, E Yamamoto, T Saiki
Publication Title
Magazine name Applied Physics Letters 117 (22), 221601 Volume 117(Issue 22) (Publication Date)2020)
ISSN
0003-6951

Instability of buried hydration sites increases protein subdomains fluctuations in the human prion protein by the pathogenic mutation T188R

Author
K Tomobe, E Yamamoto, T Akimoto, M Yasui, K Yasuoka
Publication Title
Magazine name AIP Advances 6 (5), 055324 Volume 6(Issue 5) (Publication Date)2016)
ISSN
2158-3226