Keio University

Published papers

Yugi, Katsuyuki

1-8 items (total 8)

Multiple High-Throughput Analyses Monitor the Response of E. coli to Perturbations

Author
Ishii, N., Nakahigashi, K., Baba, T., Robert, M., Soga, T., Kanai, A., Hirasawa, T., Naba, M., Hirai, K., Hoque, A., Ho, P.Y., Kakazu, Y., Sugawara, K., Igarashi, S., Harada, S., Masuda, T., Sugiyama, N., Togashi, T., Hasegawa, M., Takai, Y., Yugi, K., Arakawa, K., Iwata, N., Toya, Y., Nakayama, Y., Nishioka, T., Shimizu, K., Mori, H. and Tomita, M.
Publication Title
Magazine name Science (Publication Date)2007)
Authorship Category
Joint Work
Publication Category
Research paper (scientific journal)
Peer-review Status
With

A microarray data-based semi-kinetic method for predicting quantitative dynamics of large-scale genetic network

Author
YUGI Katsuyuki Nakayama, Y. Kojima, S. Kitayama, T. Tomita M.,
Publication Title
Magazine name BMC Bioinformatics Start Page 299-308 (Publication Date)2005)
Authorship Category
Joint Work
Publication Category
Research paper (scientific journal)
Peer-review Status
With

Hybrid dynamic/static simulation method for large-scale metabolic pathways

Author
YUGI Katsuyuki Nakayama, Y. Kinoshita, A Tomita, M.
Publication Title
Magazine name Theoretical Biology and Medical Modelling Start Page 42-52 (Publication Date)2005)
Authorship Category
Single Work
Publication Category
Research paper (scientific journal)
Peer-review Status
With

A general computational model of mitochondrial metabolism in a whole organelle scale

Author
YUGI Katsuyuki Tomita, M.
Publication Title
Magazine name Bioinformatics Start Page 1795-1796 (Publication Date)2004)
Authorship Category
Single Work
Publication Category
Research paper (scientific journal)
Peer-review Status
With

Computational challenges in cell simulation

Author
Takahashi, K. YUGI Katsuyuki Hashimoto, K. Yamada, Y. Pickett, C. Tomita, M.
Publication Title
Magazine name IEEE Intelligent Systems Start Page 64-71 (Publication Date)2002)
Authorship Category
Joint Work
Publication Category
Research paper (scientific journal)
Peer-review Status
With

The E-CELL project: towards integrative simulation of cellular processes

Author
Tomita, M. Hashimoto, K. Takahashi, K. Matsuzaki, Y. Matsushima, R. Saito, K. YUGI Katsuyuki Miyoshi, F. Nakano, H. Tanida, S. Saito, Y. Kawase, A. Watanabe, N. Shimizu, T.S. Nakayama, Y.
Publication Title
Start Page 1-12 (Publication Date)2000)
Authorship Category
Joint Work
Publication Category
Research paper (scientific journal)
Peer-review Status
With

E-CELL: Software environment for whole cell simulation

Author
Tomita, M. Hashimoto, K. Takahashi, K. Shimizu, T.S. Matsuzaki, Y. Miyoshi, F. Saito, K. Tanida, S. YUGI Katsuyuki Venter, J.C. Hutchison, C.A.
Publication Title
Magazine name Bioinformatics Start Page 72-84 (Publication Date)1999)
Authorship Category
Joint Work
Publication Category
Research paper (scientific journal)
Peer-review Status
With

E-CELL: Software Environment for Whole Cell Simulation Genome Inform. 8:147-155, 1997.

Author
Tomita, M., Hashimoto, K., Takahashi, K., Shimizu, T., Matsuzaki, Y., Miyoshi, F., Saito, K., Tanida, S., Yugi, K., Venter, J.C. and Hutchison, C.A.
Publication Title
Magazine name Genome Inform. Start Page 145-155 (Publication Date)1997)
Authorship Category
Joint Work
Publication Category
Research paper (scientific journal)
Peer-review Status
With